1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c11_25370V3.1

Pp3c11_25370V3.1


Description : No annotation


Gene families : OG0007573 (Archaeplastida) Phylogenetic Tree(s): OG0007573_tree ,
OG_05_0005631 (LandPlants) Phylogenetic Tree(s): OG_05_0005631_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_25370V3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_22330V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c23_7210V3.1 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
Pp3c2_2600V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_1680V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c7_1020V3.1 No alias target of AVRB operation1 0.03 Archaeplastida
Pp3c7_6190V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!