Pp3c11_510V3.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0000482 (Archaeplastida) Phylogenetic Tree(s): OG0000482_tree ,
OG_05_0003724 (LandPlants) Phylogenetic Tree(s): OG_05_0003724_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_510V3.1
Cluster	HCCA: Cluster_274

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00225030	evm_27.TU.AmTr_v1...	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.03	Archaeplastida
AMTR_s00002p00261540	evm_27.TU.AmTr_v1...	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.03	Archaeplastida
AMTR_s00068p00202400	evm_27.TU.AmTr_v1...	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.02	Archaeplastida
AT3G18600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
Cpa\|evm.model.tig00020684.38	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.02	Archaeplastida
Cre03.g156150	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana	0.03	Archaeplastida
Cre06.g282600	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre07.g314900	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01008218001	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.03	Archaeplastida
Gb_12810	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.03	Archaeplastida
LOC_Os01g07080.1	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.02	Archaeplastida
LOC_Os03g58810.1	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.02	Archaeplastida
LOC_Os05g01990.1	No alias	DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa...	0.03	Archaeplastida
MA_10334041g0020	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis...	0.02	Archaeplastida
MA_10435702g0020	No alias	DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa...	0.02	Archaeplastida
MA_7914832g0010	No alias	No annotation	0.02	Archaeplastida
Mp7g12890.1	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.03	Archaeplastida
Pp3c11_500V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
Pp3c1_22540V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
Smo104808	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.02	Archaeplastida
Solyc02g078880.4.1	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis...	0.03	Archaeplastida
Solyc03g114370.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc07g064520.3.1	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e010480_P001	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa...	0.03	Archaeplastida
Zm00001e011842_P001	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.02	Archaeplastida
Zm00001e016823_P002	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.03	Archaeplastida
Zm00001e027024_P001	No alias	DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	34	205
IPR001650	Helicase_C	254	367
IPR025313	DUF4217	410	466

External Links

No external refs found!

Pp3c11_510V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation