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  5. Pp3c11_7590V3.1

Pp3c11_7590V3.1


Description : No annotation


Gene families : OG0000841 (Archaeplastida) Phylogenetic Tree(s): OG0000841_tree ,
OG_05_0001109 (LandPlants) Phylogenetic Tree(s): OG_05_0001109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_7590V3.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_7650V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c11_7700V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c14_2700V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c16_2611V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c19_9339V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_5460V3.1 No alias DNAse I-like superfamily protein 0.03 Archaeplastida
Pp3c20_9580V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c22_22790V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c27_1601V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c27_5850V3.1 No alias DNAse I-like superfamily protein 0.04 Archaeplastida
Pp3c2_2462V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c3_28850V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c6_17607V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c7_3520V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c9_5750V3.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 4 96
No external refs found!