Pp3c12_10200V3.1


Description : Ribosomal protein L2 family


Gene families : OG0001917 (Archaeplastida) Phylogenetic Tree(s): OG0001917_tree ,
OG_05_0001773 (LandPlants) Phylogenetic Tree(s): OG_05_0001773_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_10200V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00109050 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT2G18020 EMB2296 Ribosomal protein L2 family 0.17 Archaeplastida
AT4G36130 No alias Ribosomal protein L2 family 0.13 Archaeplastida
Cpa|evm.model.tig00020965.22 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre12.g535851 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01014552001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
LOC_Os12g38000.1 No alias component RPL8 of LSU proteome component 0.14 Archaeplastida
MA_10431163g0010 No alias component RPL8 of LSU proteome component 0.05 Archaeplastida
MA_219740g0010 No alias component RPL8 of LSU proteome component 0.03 Archaeplastida
MA_307029g0010 No alias component RPL8 of LSU proteome component 0.03 Archaeplastida
MA_383747g0010 No alias component RPL8 of LSU proteome component 0.02 Archaeplastida
Mp7g01860.1 No alias component RPL8 of LSU proteome component 0.15 Archaeplastida
Mp7g08730.1 No alias component RPL8 of LSU proteome component 0.1 Archaeplastida
Pp3c13_23630V3.1 No alias Ribosomal protein L2 family 0.12 Archaeplastida
Smo170971 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Solyc07g063890.2.1 No alias component RPL8 of LSU proteome component 0.15 Archaeplastida
Solyc12g005330.2.1 No alias component RPL8 of LSU proteome component 0.2 Archaeplastida
Zm00001e002931_P001 No alias component RPL8 of LSU proteome component 0.24 Archaeplastida
Zm00001e018178_P001 No alias component RPL8 of LSU proteome component 0.15 Archaeplastida
Zm00001e033350_P001 No alias component RPL8 of LSU proteome component 0.22 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 98 230
IPR022666 Rbsml_prot_L2_RNA-bd_dom 14 90
No external refs found!