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  5. Pp3c12_13790V3.1

Pp3c12_13790V3.1


Description : ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases


Gene families : OG0001405 (Archaeplastida) Phylogenetic Tree(s): OG0001405_tree ,
OG_05_0005398 (LandPlants) Phylogenetic Tree(s): OG_05_0005398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_13790V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00143390 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
AT5G16715 EMB2247 ATP binding;valine-tRNA ligases;aminoacyl-tRNA... 0.12 Archaeplastida
Cpa|evm.model.tig00000402.37 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cpa|evm.model.tig00001130.5 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Cre07.g350500 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.13 Archaeplastida
Cre12.g537100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Gb_39267 No alias valine-tRNA ligase 0.08 Archaeplastida
LOC_Os07g06940.1 No alias valine-tRNA ligase 0.04 Archaeplastida
MA_175189g0010 No alias valine-tRNA ligase 0.02 Archaeplastida
MA_374514g0010 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.12 Archaeplastida
Mp2g20730.1 No alias valine-tRNA ligase 0.1 Archaeplastida
Mp4g09690.1 No alias valine-tRNA ligase 0.02 Archaeplastida
Solyc12g019100.2.1 No alias Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.1 Archaeplastida
Solyc12g019110.3.1 No alias valine-tRNA ligase 0.11 Archaeplastida
Zm00001e010301_P002 No alias valine-tRNA ligase 0.02 Archaeplastida
Zm00001e011483_P001 No alias valine-tRNA ligase 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!