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  5. Pp3c12_14110V3.1

Pp3c12_14110V3.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000953 (Archaeplastida) Phylogenetic Tree(s): OG0000953_tree ,
OG_05_0000628 (LandPlants) Phylogenetic Tree(s): OG_05_0000628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_14110V3.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00110500 evm_27.TU.AmTr_v1... UBP1-associated protein 2C OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00101p00033020 evm_27.TU.AmTr_v1... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_8212g0010 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 175 231
IPR000504 RRM_dom 84 150
No external refs found!