Pp3c12_17520V3.1

Description : ABC-2 and Plant PDR ABC-type transporter family protein

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0088147 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c12_17520V3.1
Cluster	HCCA: Cluster_299

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00117310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00122p00119310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G15520	ABCG40, PDR12,...	pleiotropic drug resistance 12	0.02	Archaeplastida
AT3G30842	ATPDR10, PDR10	pleiotropic drug resistance 10	0.02	Archaeplastida
AT4G15215	ATPDR13, PDR13	pleiotropic drug resistance 13	0.03	Archaeplastida
Cpa\|evm.model.tig00020537.52	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_28918	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_37006	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os01g42350.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g42410.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os06g36090.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os11g37700.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10429038g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.03	Archaeplastida
MA_10436632g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10437197g0020	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_18770g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_30116g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 347.0)	0.02	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c16_9600V3.1	No alias	pleiotropic drug resistance 11	0.03	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo133564	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc08g067610.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc09g091660.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Solyc11g007280.3.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc11g007300.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e016714_P002	No alias	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e039353_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	571	706
IPR013525	ABC_2_trans	337	535
IPR013525	ABC_2_trans	866	950

External Links

No external refs found!

Pp3c12_17520V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation