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  5. Pp3c12_1870V3.1

Pp3c12_1870V3.1


Description : embryo defective 1703


Gene families : OG0005028 (Archaeplastida) Phylogenetic Tree(s): OG0005028_tree ,
OG_05_0006590 (LandPlants) Phylogenetic Tree(s): OG_05_0006590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_1870V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00235990 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00045p00210490 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT3G61780 emb1703 embryo defective 1703 0.05 Archaeplastida
GSVIVT01027152001 No alias No description available 0.03 Archaeplastida
Gb_15616 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_171750g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp8g11930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g080760.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g096010.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!