1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c12_21560V3.1

Pp3c12_21560V3.1


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000564 (LandPlants) Phylogenetic Tree(s): OG_05_0000564_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_21560V3.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G47800 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Gb_32071 No alias BTB/POZ domain-containing protein At5g48130... 0.01 Archaeplastida
Gb_41063 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g22600.1 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
LOC_Os03g41350.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os06g08550.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10428359g0010 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10430653g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
MA_14938g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.01 Archaeplastida
MA_45208g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.01 Archaeplastida
MA_9526427g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g13430.1 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Pp3c16_15610V3.1 No alias Phototropic-responsive NPH3 family protein 0.01 Archaeplastida
Pp3c16_17420V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c6_12160V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Smo74933 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Smo81263 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Solyc01g098820.3.1 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc01g107180.3.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g040040.2.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Zm00001e000726_P002 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e009259_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014998_P003 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Zm00001e016727_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!