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  5. AT4G16520

AT4G16520 (ATG8F)


Aliases : ATG8F

Description : Ubiquitin-like superfamily protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0001268 (LandPlants) Phylogenetic Tree(s): OG_05_0001268_tree ,
OG_06_0001955 (SeedPlants) Phylogenetic Tree(s): OG_06_0001955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16520
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021108.41 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
LOC_Os11g01010.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006914 autophagy ISS Interproscan
MF GO:0008017 microtubule binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005776 autophagosome IEP Neighborhood
BP GO:0006788 heme oxidation IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0010019 chloroplast-nucleus signaling pathway IEP Neighborhood
BP GO:0010024 phytochromobilin biosynthetic process IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010225 response to UV-C IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0034644 cellular response to UV IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0051202 phytochromobilin metabolic process IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071494 cellular response to UV-C IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!