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  5. Pp3c12_23940V3.1

Pp3c12_23940V3.1


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_23940V3.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.02 Archaeplastida
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.03 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.03 Archaeplastida
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.02 Archaeplastida
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01017796001 No alias CASP-like protein 1D1 OS=Vitis vinifera 0.02 Archaeplastida
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_26811 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
LOC_Os01g13560.1 No alias CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os04g38690.1 No alias Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.02 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os08g01160.1 No alias Casparian strip membrane protein 2 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os12g41690.1 No alias CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.01 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.02 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 Archaeplastida
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c22_13920V3.1 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
Solyc01g067330.3.1 No alias CASP-like protein 1E1 OS=Glycine max... 0.03 Archaeplastida
Solyc02g088160.4.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 Archaeplastida
Solyc04g005620.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.02 Archaeplastida
Solyc05g007790.3.1 No alias Casparian strip membrane protein 2 OS=Solanum demissum... 0.02 Archaeplastida
Solyc06g074230.3.1 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.02 Archaeplastida
Solyc09g010200.4.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.03 Archaeplastida
Solyc10g083250.2.1 No alias Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.02 Archaeplastida
Zm00001e003216_P001 No alias CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.02 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.02 Archaeplastida
Zm00001e009346_P001 No alias CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 309.0) 0.03 Archaeplastida
Zm00001e026902_P001 No alias CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!