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  5. Pp3c12_24350V3.1

Pp3c12_24350V3.1


Description : squamosa promoter binding protein-like 8


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_24350V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00058370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00022p00106940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.03 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.03 Archaeplastida
GSVIVT01010496001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01028208001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_23724 No alias transcription factor (SBP) 0.01 Archaeplastida
Gb_26600 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.01 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10049111g0010 No alias transcription factor (SBP) 0.01 Archaeplastida
MA_10432997g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_7789506g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_23940V3.1 No alias squamosa promoter binding protein-like 1 0.02 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.03 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc05g015510.3.1 No alias transcription factor (SBP) 0.01 Archaeplastida
Solyc05g053240.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e003571_P002 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e028442_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e037693_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!