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  5. Pp3c12_3220V3.1

Pp3c12_3220V3.1


Description : Glycogen/starch synthases, ADP-glucose type


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0006175 (LandPlants) Phylogenetic Tree(s): OG_05_0006175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_3220V3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263000 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 Archaeplastida
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT1G11720 ATSS3, SS3 starch synthase 3 0.04 Archaeplastida
Cre04.g215150 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.01 Archaeplastida
Cre06.g282000 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
Gb_37508 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
MA_10437211g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c2_29290V3.1 No alias starch synthase 4 0.03 Archaeplastida
Smo155312 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
Solyc02g088000.3.1 No alias starch synthase (SSII) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!