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  5. Pp3c12_4500V3.1

Pp3c12_4500V3.1


Description : Reticulon family protein


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_4500V3.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AT3G61560 No alias Reticulon family protein 0.02 Archaeplastida
Gb_10741 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
LOC_Os01g12650.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
LOC_Os03g21840.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
MA_10432752g0010 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
Mp6g03260.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Zm00001e016413_P001 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Zm00001e026095_P001 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Zm00001e041897_P001 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!