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  5. Pp3c12_6548V3.1

Pp3c12_6548V3.1


Description : EF hand calcium-binding protein family


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0023301 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_6548V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G24620 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
AT4G37010 CEN2 centrin 2 0.02 Archaeplastida
GSVIVT01015585001 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os01g16240.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.01 Archaeplastida
MA_10429336g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 Archaeplastida
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_51891g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_66144g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Mp5g22000.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Smo233632 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo83841 No alias Calmodulin-5/6/7/8 OS=Solanum tuberosum 0.03 Archaeplastida
Smo91501 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 Archaeplastida
Solyc03g083520.4.1 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.07 Archaeplastida
Solyc04g008000.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e010984_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 32 60
IPR002048 EF_hand_dom 115 179
No external refs found!