Pp3c12_6690V3.1


Description : polygalacturonase 1


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_6690V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 Archaeplastida
AMTR_s00076p00180150 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.02 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.03 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_01410 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Gb_08843 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_41422 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.05 Archaeplastida
MA_185772g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_185806g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_196669g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2153472g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_250203g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g16190.1 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Pp3c3_19890V3.1 No alias polygalacturonase 2 0.02 Archaeplastida
Solyc02g062313.1.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc02g062317.1.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc02g062320.3.1 No alias BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc05g005560.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.04 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e022326_P001 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 117 332
No external refs found!