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  5. Pp3c12_8160V3.1

Pp3c12_8160V3.1


Description : RAB GTPase homolog 1C


Gene families : OG0001076 (Archaeplastida) Phylogenetic Tree(s): OG0001076_tree ,
OG_05_0088010 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_8160V3.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G17530 RAB1C, ATRAB1C, ATRABD2C RAB GTPase homolog 1C 0.01 Archaeplastida
AT5G47200 ATRAB1A, ATRABD2B, RAB1A RAB GTPase homolog 1A 0.02 Archaeplastida
MA_10428310g0010 No alias Ras-related protein RIC1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc05g052070.3.1 No alias D-class RAB GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!