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  5. Pp3c12_900V3.1

Pp3c12_900V3.1


Description : TRAF-like superfamily protein


Gene families : OG0001944 (Archaeplastida) Phylogenetic Tree(s): OG0001944_tree ,
OG_05_0002285 (LandPlants) Phylogenetic Tree(s): OG_05_0002285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_900V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00232980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 Archaeplastida
AT5G43560 No alias TRAF-like superfamily protein 0.03 Archaeplastida
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 Archaeplastida
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.09 Archaeplastida
LOC_Os01g56800.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
LOC_Os05g43280.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.09 Archaeplastida
LOC_Os12g40520.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 Archaeplastida
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 Archaeplastida
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 Archaeplastida
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 Archaeplastida
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.08 Archaeplastida
Zm00001e018034_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 Archaeplastida
Zm00001e019653_P002 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 Archaeplastida
Zm00001e027387_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.09 Archaeplastida
Zm00001e032087_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!