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  5. AT4G16880

AT4G16880


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000769 (LandPlants) Phylogenetic Tree(s): OG_05_0000769_tree ,
OG_06_0000349 (SeedPlants) Phylogenetic Tree(s): OG_06_0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G16880
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250450 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 Archaeplastida
AMTR_s00036p00213460 No alias External stimuli response.biotic stress.pathogen... 0.01 Archaeplastida
AMTR_s00052p00159030 evm_27.TU.AmTr_v1... Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G17615 No alias Disease resistance protein (TIR-NBS class) 0.04 Archaeplastida
AT1G57650 No alias ATP binding 0.03 Archaeplastida
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.02 Archaeplastida
AT1G72900 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.02 Archaeplastida
AT1G72910 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.03 Archaeplastida
AT1G72930 TIR toll/interleukin-1 receptor-like 0.05 Archaeplastida
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.02 Archaeplastida
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
AT3G25505 No alias No description available 0.01 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.02 Archaeplastida
AT5G46270 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.02 Archaeplastida
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.09 Archaeplastida
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_04748 No alias effector receptor (NLR) 0.02 Archaeplastida
Gb_05909 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.01 Archaeplastida
Gb_11356 No alias effector receptor (NLR) 0.05 Archaeplastida
Gb_16251 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 Archaeplastida
Gb_23544 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_25097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 Archaeplastida
Gb_26523 No alias effector receptor (NLR) 0.01 Archaeplastida
Gb_29041 No alias effector receptor (NLR) 0.02 Archaeplastida
Gb_29679 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.01 Archaeplastida
Gb_30989 No alias effector receptor (NLR) 0.03 Archaeplastida
MA_516333g0010 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc02g032650.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.01 Archaeplastida
Solyc07g052780.3.1 No alias effector receptor (NLR) 0.08 Archaeplastida
Solyc07g063360.1.1 No alias effector receptor (NLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
InterPro domains Description Start Stop
IPR011713 Leu-rich_rpt_3 125 145
No external refs found!