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  5. Pp3c13_14630V3.1

Pp3c13_14630V3.1


Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG0007221 (Archaeplastida) Phylogenetic Tree(s): OG0007221_tree ,
OG_05_0005184 (LandPlants) Phylogenetic Tree(s): OG_05_0005184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_14630V3.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_25280V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c11_13900V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c11_14490V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c15_13750V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c16_12570V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c25_2990V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c2_18826V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c2_390V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c3_18830V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c4_24900V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c6_15720V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c9_12701V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 117 317
IPR013103 RVT_2 7 90
IPR006134 DNA-dir_DNA_pol_B_multi_dom 385 700
No external refs found!