1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c13_1470V3.1

Pp3c13_1470V3.1


Description : glycosyl hydrolase 9C2


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000489 (LandPlants) Phylogenetic Tree(s): OG_05_0000489_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_1470V3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00146230 evm_27.TU.AmTr_v1... Endoglucanase 2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00024p00234390 evm_27.TU.AmTr_v1... Endoglucanase 16 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00112p00047400 evm_27.TU.AmTr_v1... Endoglucanase 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00224p00023160 evm_27.TU.AmTr_v1... Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G02800 ATCEL2, CEL2 cellulase 2 0.03 Archaeplastida
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.04 Archaeplastida
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.03 Archaeplastida
AT3G43860 AtGH9A4, GH9A4 glycosyl hydrolase 9A4 0.02 Archaeplastida
GSVIVT01018619001 No alias Endoglucanase 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_21389 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
Gb_21395 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida
Gb_28546 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g12070.1 No alias Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g21070.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os02g53820.1 No alias Endoglucanase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os06g14540.1 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g29770.1 No alias Endoglucanase 20 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os09g36350.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_132273g0020 No alias Endoglucanase 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_195523g0010 No alias Endoglucanase 16 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_20530g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_216572g0010 No alias Endoglucanase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_480961g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Pp3c13_24600V3.1 No alias glycosyl hydrolase 9C2 0.03 Archaeplastida
Solyc08g083210.3.1 No alias Endoglucanase 1 OS=Persea americana... 0.02 Archaeplastida
Zm00001e013277_P001 No alias Endoglucanase 18 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e013675_P001 No alias Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e015739_P002 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e041926_P001 No alias Endoglucanase 13 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!