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  5. Pp3c13_16000V3.1

Pp3c13_16000V3.1


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG0000561 (Archaeplastida) Phylogenetic Tree(s): OG0000561_tree ,
OG_05_0000421 (LandPlants) Phylogenetic Tree(s): OG_05_0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_16000V3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.12 Archaeplastida
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.17 Archaeplastida
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.16 Archaeplastida
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.19 Archaeplastida
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.14 Archaeplastida
Cre02.g120100 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Cre02.g120150 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 Archaeplastida
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 Archaeplastida
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Archaeplastida
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.11 Archaeplastida
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Archaeplastida
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Pp3c2_4100V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Archaeplastida
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 Archaeplastida
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 Archaeplastida
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 Archaeplastida
Zm00001e009125_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e024168_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!