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  5. AT4G17200

AT4G17200


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17200
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G32140 No alias F-box family protein 0.03 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.05 Archaeplastida
AT2G04920 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT2G39355 No alias No description available 0.02 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G18330 No alias F-box family protein 0.06 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22710 No alias F-box family protein 0.02 Archaeplastida
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G25460 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G04690 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G36190 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000769 syncytium formation by mitosis without cytokinesis IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010528 regulation of transposition IEP Neighborhood
BP GO:0010529 negative regulation of transposition IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030638 polyketide metabolic process IEP Neighborhood
BP GO:0030639 polyketide biosynthetic process IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031057 negative regulation of histone modification IEP Neighborhood
BP GO:0031058 positive regulation of histone modification IEP Neighborhood
BP GO:0031060 regulation of histone methylation IEP Neighborhood
BP GO:0031062 positive regulation of histone methylation IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
MF GO:0031490 chromatin DNA binding IEP Neighborhood
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0035065 regulation of histone acetylation IEP Neighborhood
BP GO:0035067 negative regulation of histone acetylation IEP Neighborhood
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051570 regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080110 sporopollenin biosynthetic process IEP Neighborhood
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1901983 regulation of protein acetylation IEP Neighborhood
BP GO:1901984 negative regulation of protein acetylation IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905268 negative regulation of chromatin organization IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 190 377
IPR001810 F-box_dom 3 39
No external refs found!