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  5. Pp3c13_16440V3.1

Pp3c13_16440V3.1


Description : plant U-box 13


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000690 (LandPlants) Phylogenetic Tree(s): OG_05_0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_16440V3.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.03 Archaeplastida
GSVIVT01007275001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01030205001 No alias U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.02 Archaeplastida
Gb_20805 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_24091 No alias U-box domain-containing protein 14 OS=Arabidopsis... 0.02 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
MA_10431467g0020 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g082440.4.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e002954_P001 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Zm00001e003398_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!