1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c13_21890V3.1

Pp3c13_21890V3.1


Description : RING-H2 finger C1A


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_21890V3.1
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Archaeplastida
AT5G01980 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Archaeplastida
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_10869 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Gb_40322 No alias AIP2 signal transducer of abscisic acid perception 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.03 Archaeplastida
LOC_Os05g40980.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os09g06770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g34590.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
MA_10427259g0010 No alias E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g04520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g007180.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g074460.3.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e024003_P001 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 Archaeplastida
Zm00001e027319_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e028905_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!