Pp3c13_23560V3.1


Description : ubiquitin-specific protease 25


Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0006402 (LandPlants) Phylogenetic Tree(s): OG_05_0006402_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_23560V3.1
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT5G65450 UBP17 ubiquitin-specific protease 17 0.02 Archaeplastida
GSVIVT01033166001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01038082001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
LOC_Os05g43480.1 No alias deubiquitinase (UBP25) 0.02 Archaeplastida
LOC_Os08g37350.1 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
Smo420048 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
Solyc02g005000.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g005600.1.1 No alias Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e027381_P003 No alias deubiquitinase (UBP25) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!