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  5. Pp3c13_2420V3.1

Pp3c13_2420V3.1


Description : EF hand calcium-binding protein family


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0023301 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2420V3.1
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT3G51920 ATCML9, CAM9, CML9 calmodulin 9 0.02 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
GSVIVT01029852001 No alias Calcium-binding allergen Bet v 3 OS=Betula pendula 0.01 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_1190858g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_254754g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_822732g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g14930.1 No alias Probable calcium-binding protein CML23 OS=Arabidopsis... 0.01 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20450.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 Archaeplastida
Pp3c12_6540V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c14_8590V3.1 No alias calmodulin 5 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g077010.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g079755.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e007722_P001 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e012873_P001 No alias DNA repair protein (CEN2). centrin component CEN of... 0.02 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e018064_P001 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 36 93
IPR002048 EF_hand_dom 119 181
No external refs found!