AT4G17590


Description : CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26600.1); Has 459 Blast hits to 368 proteins in 186 species: Archae - 2; Bacteria - 0; Metazoa - 137; Fungi - 144; Plants - 100; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).


Gene families : OG0004195 (Archaeplastida) Phylogenetic Tree(s): OG0004195_tree ,
OG_05_0004343 (LandPlants) Phylogenetic Tree(s): OG_05_0004343_tree ,
OG_06_0004066 (SeedPlants) Phylogenetic Tree(s): OG_06_0004066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17590
Cluster HCCA: Cluster_61


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 50 142
No external refs found!