1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c13_2900V3.1

Pp3c13_2900V3.1


Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0000163 (Archaeplastida) Phylogenetic Tree(s): OG0000163_tree ,
OG_05_0000066 (LandPlants) Phylogenetic Tree(s): OG_05_0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2900V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_3810V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c14_13600V3.1 No alias Protein kinase superfamily protein 0.04 Archaeplastida
Pp3c16_21730V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_20870V3.1 No alias transmembrane receptors;ATP binding 0.03 Archaeplastida
Pp3c17_20880V3.1 No alias transmembrane receptors;ATP binding 0.03 Archaeplastida
Pp3c17_8727V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_8740V3.1 No alias Protein kinase family protein 0.02 Archaeplastida
Pp3c17_8750V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
Pp3c18_18616V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c20_20760V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c20_21220V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c20_2990V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_3010V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c21_18290V3.1 No alias Protein kinase family protein 0.02 Archaeplastida
Pp3c2_13130V3.1 No alias Protein kinase superfamily protein with... 0.03 Archaeplastida
Pp3c3_30870V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Pp3c5_12060V3.1 No alias MAP kinase kinase 2 0.03 Archaeplastida
Pp3c6_5920V3.1 No alias Protein kinase family protein 0.04 Archaeplastida
Pp3c8_13790V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c9_16390V3.1 No alias Protein kinase family protein 0.04 Archaeplastida
Pp3c9_9314V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3s203_50V3.1 No alias No annotation 0.03 Archaeplastida
Pp3s794_20V3.1 No alias transmembrane receptors;ATP binding 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 24 250
No external refs found!