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  5. Pp3c13_8440V3.1

Pp3c13_8440V3.1


Description : expansin A9


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_8440V3.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01035233001 No alias Expansin-A13 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os02g16780.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_40671g0010 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g14140.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g03890.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc02g081210.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e007142_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e041376_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!