AT4G17800

Description : Predicted AT-hook DNA-binding family protein

Gene families : OG0000411 (Archaeplastida) Phylogenetic Tree(s): OG0000411_tree ,
OG_05_0000205 (LandPlants) Phylogenetic Tree(s): OG_05_0000205_tree ,
OG_06_0000150 (SeedPlants) Phylogenetic Tree(s): OG_06_0000150_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17800
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00189120	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 20...	0.04	Archaeplastida
AMTR_s00041p00022450	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 24...	0.03	Archaeplastida
AMTR_s00041p00025000	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 24...	0.04	Archaeplastida
AMTR_s00135p00017880	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 17...	0.04	Archaeplastida
AMTR_s00149p00093420	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 23...	0.04	Archaeplastida
AT4G22810	No alias	Predicted AT-hook DNA-binding family protein	0.05	Archaeplastida
GSVIVT01013202001	No alias	AT-hook motif nuclear-localized protein 23...	0.04	Archaeplastida
GSVIVT01016497001	No alias	AT-hook motif nuclear-localized protein 15...	0.08	Archaeplastida
GSVIVT01019932001	No alias	AT-hook motif nuclear-localized protein 24...	0.04	Archaeplastida
GSVIVT01036210001	No alias	AT-hook motif nuclear-localized protein 19...	0.04	Archaeplastida
Gb_15730	No alias	AT-hook motif nuclear-localized protein 16...	0.03	Archaeplastida
Gb_33065	No alias	AT-hook motif nuclear-localized protein 20...	0.03	Archaeplastida
Gb_34320	No alias	AT-hook motif nuclear-localized protein 24...	0.03	Archaeplastida
LOC_Os02g25020.1	No alias	AT-hook motif nuclear-localized protein 22...	0.05	Archaeplastida
LOC_Os02g48320.3	No alias	AT-hook motif nuclear-localized protein 25...	0.03	Archaeplastida
LOC_Os03g16350.1	No alias	AT-hook motif nuclear-localized protein 22...	0.02	Archaeplastida
LOC_Os04g50030.1	No alias	AT-hook motif nuclear-localized protein 23...	0.04	Archaeplastida
LOC_Os08g06320.1	No alias	AT-hook motif nuclear-localized protein 23...	0.05	Archaeplastida
LOC_Os08g44910.1	No alias	AT-hook motif nuclear-localized protein 20...	0.07	Archaeplastida
MA_2055g0010	No alias	AT-hook motif nuclear-localized protein 23...	0.03	Archaeplastida
MA_284g0020	No alias	AT-hook motif nuclear-localized protein 23...	0.03	Archaeplastida
MA_5409554g0010	No alias	No annotation	0.03	Archaeplastida
MA_5413253g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_90407g0010	No alias	AT-hook motif nuclear-localized protein 22...	0.01	Archaeplastida
Pp3c10_8330V3.1	No alias	Predicted AT-hook DNA-binding family protein	0.05	Archaeplastida
Pp3c2_3980V3.1	No alias	Predicted AT-hook DNA-binding family protein	0.02	Archaeplastida
Solyc01g080960.4.1	No alias	AT-hook motif nuclear-localized protein 21...	0.03	Archaeplastida
Solyc01g091470.3.1	No alias	AT-hook motif nuclear-localized protein 22...	0.06	Archaeplastida
Solyc07g056300.1.1	No alias	AT-hook motif nuclear-localized protein 16...	0.03	Archaeplastida
Solyc08g077010.1.1	No alias	AT-hook motif nuclear-localized protein 23...	0.05	Archaeplastida
Solyc08g079720.3.1	No alias	AT-hook motif nuclear-localized protein 22...	0.04	Archaeplastida
Solyc09g089620.1.1	No alias	AT-hook motif nuclear-localized protein 20...	0.05	Archaeplastida
Solyc11g006090.3.1	No alias	AT-hook motif nuclear-localized protein 19...	0.06	Archaeplastida
Zm00001e001193_P001	No alias	AT-hook motif nuclear-localized protein 22...	0.03	Archaeplastida
Zm00001e003878_P001	No alias	AT-hook motif nuclear-localized protein 20...	0.03	Archaeplastida
Zm00001e007105_P001	No alias	AT-hook motif nuclear-localized protein 23...	0.06	Archaeplastida
Zm00001e014298_P001	No alias	AT-hook motif nuclear-localized protein 22...	0.03	Archaeplastida
Zm00001e015634_P001	No alias	AT-hook motif nuclear-localized protein 25...	0.04	Archaeplastida
Zm00001e016254_P001	No alias	AT-hook motif nuclear-localized protein 20...	0.03	Archaeplastida
Zm00001e022037_P001	No alias	AT-hook motif nuclear-localized protein 20...	0.03	Archaeplastida
Zm00001e024863_P001	No alias	AT-hook motif nuclear-localized protein 23...	0.05	Archaeplastida
Zm00001e041402_P001	No alias	AT-hook motif nuclear-localized protein 21...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010359	regulation of anion channel activity	RCA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0044070	regulation of anion transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0098754	detoxification	None	Extended
BP	GO:1903959	regulation of anion transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003680	AT DNA binding	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004351	glutamate decarboxylase activity	IEP	Neighborhood
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
MF	GO:0005545	1-phosphatidylinositol binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006148	inosine catabolic process	IEP	Neighborhood
BP	GO:0006152	purine nucleoside catabolic process	IEP	Neighborhood
BP	GO:0006154	adenosine catabolic process	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0008477	purine nucleosidase activity	IEP	Neighborhood
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009164	nucleoside catabolic process	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009647	skotomorphogenesis	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009804	coumarin metabolic process	IEP	Neighborhood
BP	GO:0009805	coumarin biosynthetic process	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010150	leaf senescence	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
MF	GO:0010283	pinoresinol reductase activity	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
MF	GO:0015368	calcium:cation antiporter activity	IEP	Neighborhood
MF	GO:0015369	calcium:proton antiporter activity	IEP	Neighborhood
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016174	NAD(P)H oxidase activity	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
BP	GO:0019722	calcium-mediated signaling	IEP	Neighborhood
BP	GO:0019932	second-messenger-mediated signaling	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	Neighborhood
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	IEP	Neighborhood
BP	GO:0031113	regulation of microtubule polymerization	IEP	Neighborhood
BP	GO:0031115	negative regulation of microtubule polymerization	IEP	Neighborhood
BP	GO:0031333	negative regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032272	negative regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032886	regulation of microtubule-based process	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
MF	GO:0042285	xylosyltransferase activity	IEP	Neighborhood
BP	GO:0042454	ribonucleoside catabolic process	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
MF	GO:0042895	antibiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0045431	flavonol synthase activity	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0046085	adenosine metabolic process	IEP	Neighborhood
BP	GO:0046102	inosine metabolic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046130	purine ribonucleoside catabolic process	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0047209	coniferyl-alcohol glucosyltransferase activity	IEP	Neighborhood
MF	GO:0047622	adenosine nucleosidase activity	IEP	Neighborhood
MF	GO:0047724	inosine nucleosidase activity	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
MF	GO:0051139	metal ion:proton antiporter activity	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
CC	GO:0055028	cortical microtubule	IEP	Neighborhood
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
MF	GO:0080045	quercetin 3'-O-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090693	plant organ senescence	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Neighborhood
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005175	PPC_dom	110	223

External Links

No external refs found!

AT4G17800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation