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  5. AT4G17850

AT4G17850


Description : BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 200 Blast hits to 194 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 11; Plants - 116; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).


Gene families : OG0001085 (Archaeplastida) Phylogenetic Tree(s): OG0001085_tree ,
OG_05_0000943 (LandPlants) Phylogenetic Tree(s): OG_05_0000943_tree ,
OG_06_0013571 (SeedPlants) Phylogenetic Tree(s): OG_06_0013571_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17850

Target Alias Description ECC score Gene Family Method Actions
Solyc03g115160.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!