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  5. AT4G18110

AT4G18110


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0047301 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042071 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18110
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G23980 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G53820 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT2G28920 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.05 Archaeplastida
AT4G10160 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre01.g009101 No alias No description available 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g19680.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g005790.4.1 No alias RING-H2 finger protein ATL46 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023969_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 154 199
No external refs found!