AT4G18260

Description : Cytochrome b561/ferric reductase transmembrane protein family

Gene families : OG0003117 (Archaeplastida) Phylogenetic Tree(s): OG0003117_tree ,
OG_05_0004231 (LandPlants) Phylogenetic Tree(s): OG_05_0004231_tree ,
OG_06_0006115 (SeedPlants) Phylogenetic Tree(s): OG_06_0006115_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18260
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00090750	evm_27.TU.AmTr_v1...	Cytochrome b561 domain-containing protein At4g18260...	0.05	Archaeplastida
GSVIVT01020846001	No alias	Cytochrome b561 domain-containing protein At2g30890...	0.12	Archaeplastida
LOC_Os01g47635.1	No alias	Cytochrome b561 domain-containing protein At2g30890...	0.06	Archaeplastida
LOC_Os05g49040.1	No alias	Cytochrome b561 domain-containing protein At2g30890...	0.05	Archaeplastida
Pp3c1_28990V3.1	No alias	Cytochrome b561/ferric reductase transmembrane protein family	0.04	Archaeplastida
Solyc02g070660.3.1	No alias	Cytochrome b561 domain-containing protein At4g18260...	0.03	Archaeplastida
Solyc07g045490.3.1	No alias	Cytochrome b561 domain-containing protein At4g18260...	0.08	Archaeplastida
Solyc07g056230.3.1	No alias	Cytochrome b561 domain-containing protein At4g18260...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0001944	vasculature development	IEP	Neighborhood
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006065	UDP-glucuronate biosynthetic process	IEP	Neighborhood
BP	GO:0006521	regulation of cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006949	syncytium formation	IEP	Neighborhood
BP	GO:0007030	Golgi organization	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Neighborhood
BP	GO:0009825	multidimensional cell growth	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010078	maintenance of root meristem identity	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
MF	GO:0010487	thermospermine synthase activity	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
CC	GO:0016461	unconventional myosin complex	IEP	Neighborhood
MF	GO:0016768	spermine synthase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
BP	GO:0017157	regulation of exocytosis	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0031559	oxidosqualene cyclase activity	IEP	Neighborhood
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0033238	regulation of cellular amine metabolic process	IEP	Neighborhood
BP	GO:0033240	positive regulation of cellular amine metabolic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
MF	GO:0042299	lupeol synthase activity	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0045764	positive regulation of cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0046398	UDP-glucuronate metabolic process	IEP	Neighborhood
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0051046	regulation of secretion	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0051648	vesicle localization	IEP	Neighborhood
BP	GO:0051650	establishment of vesicle localization	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0090354	regulation of auxin metabolic process	IEP	Neighborhood
BP	GO:0090355	positive regulation of auxin metabolic process	IEP	Neighborhood
BP	GO:0090357	regulation of tryptophan metabolic process	IEP	Neighborhood
BP	GO:0090358	positive regulation of tryptophan metabolic process	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
BP	GO:1903530	regulation of secretion by cell	IEP	Neighborhood
BP	GO:1905177	tracheary element differentiation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006593	Cyt_b561/ferric_Rdtase_TM	63	189

External Links

No external refs found!

AT4G18260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation