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  5. Pp3c14_18510V3.1

Pp3c14_18510V3.1


Description : expansin A14


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0008131 (LandPlants) Phylogenetic Tree(s): OG_05_0008131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_18510V3.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c18_19690V3.1 No alias expansin A16 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 150
IPR007117 Expansin_CBD 161 236
No external refs found!