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  5. Pp3c14_18645V3.1

Pp3c14_18645V3.1


Description : Proteasome component (PCI) domain protein


Gene families : OG0003910 (Archaeplastida) Phylogenetic Tree(s): OG0003910_tree ,
OG_05_0005226 (LandPlants) Phylogenetic Tree(s): OG_05_0005226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_18645V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00229860 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.04 Archaeplastida
AT3G02200 No alias Proteasome component (PCI) domain protein 0.05 Archaeplastida
AT5G15610 No alias Proteasome component (PCI) domain protein 0.02 Archaeplastida
Cpa|evm.model.tig00020903.23 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Cre09.g417200 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
GSVIVT01032900001 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Gb_32931 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
LOC_Os04g01290.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.11 Archaeplastida
MA_10427723g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
MA_10436971g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.09 Archaeplastida
Mp6g05770.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Smo416377 No alias Protein biosynthesis.translation... 0.07 Archaeplastida
Solyc02g089070.3.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Zm00001e025912_P001 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000717 PCI_dom 297 369
No external refs found!