Pp3c14_22300V3.1


Description : No annotation


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0032118 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_22300V3.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00009p00172890 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G63840 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.02 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G20885 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_08091 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g12680.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g42530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10431161g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_177169g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_226198g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.02 Archaeplastida
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039357_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!