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  5. AT4G18820

AT4G18820


Description : AAA-type ATPase family protein


Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0003829 (SeedPlants) Phylogenetic Tree(s): OG_06_0003829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18820
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Gb_02960 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.11 Archaeplastida
LOC_Os01g53070.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g19180.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_64150g0010 No alias Protein STICHEL-like 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g072090.2.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010073 meristem maintenance RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
CC GO:0030427 site of polarized growth IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
CC GO:0035838 growing cell tip IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044463 cell projection part IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
CC GO:0051286 cell tip IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
CC GO:0090404 pollen tube tip IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
CC GO:0120038 plasma membrane bounded cell projection part IEP Neighborhood
BP GO:2000012 regulation of auxin polar transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!