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Description : U2 snRNP auxilliary factor, large subunit, splicing factor
Gene families : OG0000654 (Archaeplastida) Phylogenetic Tree(s): OG0000654_tree ,
OG_05_0001447 (LandPlants) Phylogenetic Tree(s): OG_05_0001447_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c14_9430V3.1 | |
| Cluster | HCCA: Cluster_259 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021464.4 | No alias | No description available | 0.02 | Archaeplastida | |
| GSVIVT01027871001 | No alias | Splicing factor U2af large subunit A OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Gb_01578 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | Archaeplastida | |
| Gb_32245 | No alias | Splicing factor U2af large subunit A OS=Triticum... | 0.02 | Archaeplastida | |
| LOC_Os03g04520.2 | No alias | Splicing factor U2af large subunit B OS=Nicotiana... | 0.03 | Archaeplastida | |
| MA_9595064g0010 | No alias | Splicing factor U2af large subunit B OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Mp3g02400.1 | No alias | Splicing factor U2af large subunit A OS=Nicotiana... | 0.03 | Archaeplastida | |
| Mp6g18430.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | Archaeplastida | |
| Mp6g18910.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.04 | Archaeplastida | |
| Solyc02g062920.3.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.05 | Archaeplastida | |
| Solyc02g085570.4.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.04 | Archaeplastida | |
| Solyc09g090420.4.1 | No alias | Splicing factor U2af large subunit B OS=Oryza sativa... | 0.05 | Archaeplastida | |
| Solyc12g008750.3.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.05 | Archaeplastida | |
| Zm00001e021119_P005 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | Archaeplastida | |
| Zm00001e038951_P001 | No alias | Splicing factor U2af large subunit A OS=Nicotiana... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| MF | GO:0140104 | molecular carrier activity | IEP | Neighborhood |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |