Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG0005550 (Archaeplastida) Phylogenetic Tree(s): OG0005550_tree ,
OG_05_0006984 (LandPlants) Phylogenetic Tree(s): OG_05_0006984_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c15_1000V3.1 | |
Cluster | HCCA: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00155p00078230 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | Archaeplastida | |
AT4G05410 | YAO | Transducin/WD40 repeat-like superfamily protein | 0.06 | Archaeplastida | |
Cpa|evm.model.tig00021179.21 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | Archaeplastida | |
Cre06.g278175 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
GSVIVT01021618001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | Archaeplastida | |
Gb_41592 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.06 | Archaeplastida | |
Gb_41594 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os03g42770.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.08 | Archaeplastida | |
MA_10426194g0010 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.11 | Archaeplastida | |
Mp8g03800.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.16 | Archaeplastida | |
Solyc02g069770.3.1 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.12 | Archaeplastida | |
Zm00001e005033_P001 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.06 | Archaeplastida | |
Zm00001e012407_P002 | No alias | SSU processome assembly factor (RRP9/YAO1) | 0.09 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |