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  5. Pp3c15_10030V3.1

Pp3c15_10030V3.1


Description : 3\-5\-exoribonuclease family protein


Gene families : OG0004603 (Archaeplastida) Phylogenetic Tree(s): OG0004603_tree ,
OG_05_0005297 (LandPlants) Phylogenetic Tree(s): OG_05_0005297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_10030V3.1
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT3G60500 CER7, G3 3'-5'-exoribonuclease family protein 0.05 Archaeplastida
Cre03.g175000 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.05 Archaeplastida
LOC_Os02g34570.1 No alias component RRP45 of exosome EXO9 core complex 0.02 Archaeplastida
MA_8736261g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g03430.1 No alias component RRP45 of exosome EXO9 core complex 0.03 Archaeplastida
Solyc05g047420.4.1 No alias component RRP45 of exosome EXO9 core complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!