Description : enhancer of rudimentary protein, putative
Gene families : OG0005847 (Archaeplastida) Phylogenetic Tree(s): OG0005847_tree ,
OG_05_0006230 (LandPlants) Phylogenetic Tree(s): OG_05_0006230_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c15_19100V3.1 | |
Cluster | HCCA: Cluster_90 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os02g39830.1 | No alias | Enhancer of rudimentary homolog OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc08g006700.3.1 | No alias | Enhancer of rudimentary homolog OS=Arabidopsis thaliana... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000781 | Enh_rudimentary | 4 | 100 |
No external refs found! |