Pp3c15_22190V3.1


Description : signal recognition particle-related / SRP-related


Gene families : OG0003584 (Archaeplastida) Phylogenetic Tree(s): OG0003584_tree ,
OG_05_0006312 (LandPlants) Phylogenetic Tree(s): OG_05_0006312_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_22190V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT5G61970 No alias signal recognition particle-related / SRP-related 0.05 Archaeplastida
Cpa|evm.model.tig00020554.161 No alias Protein translocation.endoplasmic... 0.02 Archaeplastida
Cre06.g267100 No alias Protein translocation.endoplasmic... 0.02 Archaeplastida
GSVIVT01008641001 No alias Protein translocation.endoplasmic... 0.03 Archaeplastida
Gb_05066 No alias component SRP68 of SRP (signal recognition particle) complex 0.02 Archaeplastida
LOC_Os08g23360.1 No alias component SRP68 of SRP (signal recognition particle) complex 0.04 Archaeplastida
Mp1g14730.1 No alias component SRP68 of SRP (signal recognition particle) complex 0.04 Archaeplastida
Smo81908 No alias Protein translocation.endoplasmic... 0.01 Archaeplastida
Solyc02g062810.4.1 No alias component SRP68 of SRP (signal recognition particle) complex 0.02 Archaeplastida
Solyc03g093970.3.1 No alias component SRP68 of SRP (signal recognition particle) complex 0.02 Archaeplastida
Zm00001e035532_P001 No alias component SRP68 of SRP (signal recognition particle) complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!