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  5. Pp3c15_25430V3.1

Pp3c15_25430V3.1


Description : Ribosomal protein S6e


Gene families : OG0002153 (Archaeplastida) Phylogenetic Tree(s): OG0002153_tree ,
OG_05_0001864 (LandPlants) Phylogenetic Tree(s): OG_05_0001864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_25430V3.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00238890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AMTR_s00048p00058600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AMTR_s00077p00035710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
AT4G31700 RPS6A, RPS6 ribosomal protein S6 0.17 Archaeplastida
AT5G10360 EMB3010, RPS6B Ribosomal protein S6e 0.19 Archaeplastida
Cpa|evm.model.tig00000704.73 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Cre09.g400650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
GSVIVT01009072001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
GSVIVT01015776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
LOC_Os03g27260.1 No alias component RPS6 of SSU proteome 0.12 Archaeplastida
LOC_Os07g42950.1 No alias component RPS6 of SSU proteome 0.14 Archaeplastida
MA_10426804g0010 No alias component RPS6 of SSU proteome 0.1 Archaeplastida
MA_72828g0010 No alias component RPS6 of SSU proteome 0.14 Archaeplastida
Mp4g01750.1 No alias component RPS6 of SSU proteome 0.16 Archaeplastida
Pp3c15_25780V3.1 No alias Ribosomal protein S6e 0.06 Archaeplastida
Smo172795 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Solyc08g006040.3.1 No alias component RPS6 of SSU proteome 0.1 Archaeplastida
Solyc08g074240.3.1 No alias component RPS6 of SSU proteome 0.16 Archaeplastida
Solyc12g096300.2.1 No alias component RPS6 of SSU proteome 0.15 Archaeplastida
Zm00001e010802_P001 No alias component RPS6 of SSU proteome 0.17 Archaeplastida
Zm00001e035580_P002 No alias component RPS6 of SSU proteome 0.14 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!