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  5. Pp3c15_6270V3.1

Pp3c15_6270V3.1


Description : serine hydroxymethyltransferase 4


Gene families : OG0000522 (Archaeplastida) Phylogenetic Tree(s): OG0000522_tree ,
OG_05_0001515 (LandPlants) Phylogenetic Tree(s): OG_05_0001515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_6270V3.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262120 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.serine... 0.06 Archaeplastida
AT4G13930 SHM4 serine hydroxymethyltransferase 4 0.07 Archaeplastida
Cpa|evm.model.tig00001130.31 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.01 Archaeplastida
Cpa|evm.model.tig00020903.24 No alias Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre06.g293950 No alias Amino acid metabolism.biosynthesis.serine... 0.08 Archaeplastida
GSVIVT01009226001 No alias Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.04 Archaeplastida
LOC_Os11g26860.1 No alias Serine hydroxymethyltransferase 4 OS=Arabidopsis... 0.04 Archaeplastida
Smo166496 No alias Amino acid metabolism.biosynthesis.serine... 0.03 Archaeplastida
Solyc05g053810.3.1 No alias serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.03 Archaeplastida
Solyc12g098490.2.1 No alias serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.03 Archaeplastida
Zm00001e021483_P001 No alias serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!