- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G30860.1); Has 64917 Blast hits to 39974 proteins in 1949 species: Archae - 279; Bacteria - 7425; Metazoa - 26604; Fungi - 5788; Plants - 3193; Viruses - 275; Other Eukaryotes - 21353 (source: NCBI BLink).
Gene families : OG0010147 (Archaeplastida) Phylogenetic Tree(s): OG0010147_tree ,
OG_05_0009495 (LandPlants) Phylogenetic Tree(s): OG_05_0009495_tree ,
OG_06_0007074 (SeedPlants) Phylogenetic Tree(s): OG_06_0007074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G20160 | |
| Cluster | HCCA: Cluster_173 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0009507 | chloroplast | IDA | Interproscan |
| BP | GO:0048868 | pollen tube development | RCA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000902 | cell morphogenesis | IEP | Neighborhood |
| BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
| MF | GO:0005484 | SNAP receptor activity | IEP | Neighborhood |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | Neighborhood |
| BP | GO:0009664 | plant-type cell wall organization | IEP | Neighborhood |
| BP | GO:0009826 | unidimensional cell growth | IEP | Neighborhood |
| BP | GO:0009827 | plant-type cell wall modification | IEP | Neighborhood |
| BP | GO:0009860 | pollen tube growth | IEP | Neighborhood |
| BP | GO:0009932 | cell tip growth | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016049 | cell growth | IEP | Neighborhood |
| CC | GO:0030133 | transport vesicle | IEP | Neighborhood |
| CC | GO:0031410 | cytoplasmic vesicle | IEP | Neighborhood |
| CC | GO:0031982 | vesicle | IEP | Neighborhood |
| BP | GO:0032989 | cellular component morphogenesis | IEP | Neighborhood |
| BP | GO:0040007 | growth | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0048588 | developmental cell growth | IEP | Neighborhood |
| BP | GO:0048589 | developmental growth | IEP | Neighborhood |
| BP | GO:0048869 | cellular developmental process | IEP | Neighborhood |
| BP | GO:0060560 | developmental growth involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| CC | GO:0097708 | intracellular vesicle | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |