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  5. Pp3c16_1080V3.1

Pp3c16_1080V3.1


Description : GTP-binding family protein


Gene families : OG0005153 (Archaeplastida) Phylogenetic Tree(s): OG0005153_tree ,
OG_05_0006836 (LandPlants) Phylogenetic Tree(s): OG_05_0006836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_1080V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00118420 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AT3G07050 No alias GTP-binding family protein 0.13 Archaeplastida
Cpa|evm.model.tig00001215.14 No alias Guanine nucleotide-binding protein-like NSN1... 0.01 Archaeplastida
Cre12.g533050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
GSVIVT01028584001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Gb_31371 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.07 Archaeplastida
LOC_Os01g27730.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.14 Archaeplastida
MA_19380g0010 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.04 Archaeplastida
Mp8g17210.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.09 Archaeplastida
Solyc06g083520.3.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.05 Archaeplastida
Solyc09g061430.3.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.12 Archaeplastida
Zm00001e004937_P002 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.1 Archaeplastida
Zm00001e012467_P001 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 268 328
No external refs found!