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  5. Pp3c16_16950V3.1

Pp3c16_16950V3.1


Description : tRNA synthetase class I (I, L, M and V) family protein


Gene families : OG0004309 (Archaeplastida) Phylogenetic Tree(s): OG0004309_tree ,
OG_05_0004800 (LandPlants) Phylogenetic Tree(s): OG_05_0004800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_16950V3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT4G10320 No alias tRNA synthetase class I (I, L, M and V) family protein 0.02 Archaeplastida
Cpa|evm.model.tig00020904.57 No alias Enzyme classification.EC_6 ligases.EC_6.1 ligase forming... 0.04 Archaeplastida
Cre16.g651750 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 Archaeplastida
GSVIVT01010735001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
LOC_Os06g43760.1 No alias isoleucine-tRNA ligase 0.05 Archaeplastida
Mp6g20330.1 No alias isoleucine-tRNA ligase 0.05 Archaeplastida
Smo153639 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Solyc11g012140.2.1 No alias isoleucine-tRNA ligase 0.03 Archaeplastida
Zm00001e030455_P003 No alias isoleucine-tRNA ligase 0.07 Archaeplastida
Zm00001e037466_P001 No alias isoleucine-tRNA ligase 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!