1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c16_17780V3.1

Pp3c16_17780V3.1


Description : CLP protease proteolytic subunit 1


Gene families : OG0000861 (Archaeplastida) Phylogenetic Tree(s): OG0000861_tree ,
OG_05_0006945 (LandPlants) Phylogenetic Tree(s): OG_05_0006945_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_17780V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00194810 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
AT1G09130 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Archaeplastida
AT1G49970 CLPR1, SVR2, NCLPP5 CLP protease proteolytic subunit 1 0.02 Archaeplastida
Cre14.g619100 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
GSVIVT01037850001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
LOC_Os03g22430.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
MA_10429819g0020 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Pp3c3_12000V3.1 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Archaeplastida
Smo153292 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Smo65351 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!