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  5. Pp3c16_19430V3.1

Pp3c16_19430V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0089317 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_19430V3.1
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00028p00077900 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G05310 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G11370 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.03 Archaeplastida
AT2G36700 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G47280 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT3G17060 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G07410 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G07420 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G18990 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01015022001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Gb_01459 No alias pectin methylesterase 0.02 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.02 Archaeplastida
Gb_38324 No alias pectin methylesterase 0.02 Archaeplastida
Gb_39595 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os01g19440.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g44340.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os09g39760.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g43830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.05 Archaeplastida
MA_10428610g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10428610g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_181657g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_28575g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_87592g0010 No alias pectin methylesterase 0.06 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.06 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.05 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.05 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.05 Archaeplastida
Pp3c10_19460V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c25_760V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.08 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c5_12660V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Smo101090 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e020795_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e029074_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 100 364
No external refs found!